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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7801701 chr7:33083758 G/A FKBP9L chr7:55748767-55780945:- 0.4 9 5.4E-18 Box Plot
THCA rs7801986 chr7:33083972 A/C FKBP9L chr7:55748767-55780945:- -0.4 -9 5.29E-18 Box Plot
THCA rs78026114 chr12:94773672 G/A C6orf176 chr6:166337536-166401527:- -0.53 -5.93 5.73E-9 Box Plot
THCA rs7803427 chr7:33092866 T/C FKBP9L chr7:55748767-55780945:- 0.35 7.39 6.77E-13 Box Plot
THCA rs780374 chr3:59735965 A/G FHIT chr3:59735036-61237133:- -0.31 -5.98 4.32E-9 Box Plot
THCA rs78042723 chr6:26617845 T/TA ZNF322B chr9:99957633-99961910:- 0.76 15.79 1.71E-45 Box Plot
THCA rs7805365 chr7:140149768 T/C LOC441455 chr9:99488103-99489749:+ 0.5 6.77 3.74E-11 Box Plot
THCA rs7806813 chr7:33077815 C/T FKBP9L chr7:55748767-55780945:- 0.4 9.02 4.68E-18 Box Plot
THCA rs7807827 chr7:4777439 A/T NT5C2 chr10:104847774-104953063:- -0.44 -5.98 4.26E-9 Box Plot
THCA rs7808589 chr7:140162089 A/G LOC441455 chr9:99488103-99489749:+ 0.49 6.6 1.1E-10 Box Plot
THCA rs78096181 chr7:140138482 TA/T LOC441455 chr9:99488103-99489749:+ 0.47 6.34 5.31E-10 Box Plot
THCA rs7811669 chr7:140171322 C/T LOC441455 chr9:99488103-99489749:+ 0.46 6.17 1.48E-9 Box Plot
THCA rs78119177 chr2:90255767 G/C ZNF514 chr2:95813075-95831158:- -0.36 -6.61 1.02E-10 Box Plot
THCA rs7812563 chr8:11794488 T/G SGK223 chr8:8175258-8244008:- -0.46 -8.62 9.87E-17 Box Plot
THCA rs7813802 chr8:11033976 C/T SGK223 chr8:8175258-8244008:- -0.45 -8.57 1.47E-16 Box Plot